DeepLift

DeepLift(self, model, output_layer, task_idx, preact=True, mxts_mode='rescale_conv_revealcancel_fc', batch_size=32)

Wrapper around DeepLIFT

Arguments

  • model: Kipoi model
  • output_layer (int): selected Keras layer with respect to which the scores should be calculated
  • task_idx (int): Node/Neuron within the selected layer with respect to which the score should be calculated
  • preact: !NOT YET IMPLEMENTED! Use values prior to activation - for now the default is True!
  • mxts_mode: Selected score
  • batch_size: Batch size for scoring